[BioC] Error message when running arrayQuality 1.0.9

[Paquet, Agnes]

Hi Longsi,

This looks like gpQuality is trying to plot something with infinite
values. Could you please send me an example of the gpr files you are
testing to help me investigate was is causing this problem?

Best,

Agnes

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Longsi Ran
Sent: Wednesday, January 12, 2005 8:06 AM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Error message when running arrayQuality 1.0.9

Hi,
 
I am using R 2.0.1 with marray 1.5.29 and arrayQuality 1.0.9.  When I
ran
command:

rawdata <- gpQuality(TargetsGenePix$FileName, compBoxplot=FALSE)

I got error message:

Error in densfun(numeric(0), bw = 0.979616917286071) : 
        non-finite `from'
In addition: Warning messages: 
1: no finite arguments to min; returning Inf 
2: no finite arguments to max; returning -Inf

How to fix it?
 
Thanks in advance. 

Longsi Ran, M.D.
Informatics Programming Specialist
Division of Experimental Therapeutics
Toronto General Research Institute, TGH
Room 5R425, Max Bell Research Centre
200 Elizabeth St, Toronto, ON
Canada M5G 2C4

lran at uhnres.utoronto.ca
Tel:  416-340-4800 x6965
Fax:  416-340-3619

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