[BioC] Import of high resolution .CEL files

[Hrishikesh Deshmukh]

My guess is that they are binary .CEL files. I am not
sure whether ReadAffy reads in binary format.
Use the Affy SDK file parsers for conversion/check out
the tool(!!!) which Affy may provide.

Thanks,
Hrishi


--- James MacDonald <jmacdon at med.umich.edu> wrote:

> I don't know of any celfile format that ReadAffy
> can't handle. Will you
> give us some more information such as the type of
> Affy chip and the
> error message you get (cutting and pasting your R
> session is always
> nice).
> 
> Best,
> 
> Jim
> 
> 
> 
> James W. MacDonald
> Affymetrix and cDNA Microarray Core
> University of Michigan Cancer Center
> 1500 E. Medical Center Drive
> 7410 CCGC
> Ann Arbor MI 48109
> 734-647-5623
> >>> "Soumyaroop Bhattacharya"
> <sbhattacharya at rics.bwh.harvard.edu>
> 12/22/04 11:52 AM >>>
> Hi,
> I have a set of .CEL files obtained using GCOS
> version of Affy software.
> ReadAffy() is unable to read these cel files.
> Can anyone provide me with some info on this.
> I am using R version 2.01
> Any help will be appreciated.
> 
> Thanks,
> - Soumyaroop
> 
> 
> -- 
> Soumyaroop Bhattacharya, MS
> Analyst
> Pulmonary Medicine
> Brigham & Women's Hospital
> Harvard Medical School
> Thorn 908
> 75 Francis Street
> Boston MA 02115
> Phone:(617)732-6265
> Fax:(617)232-4623
> sbhattacharya at rics.bwh.harvard.edu
> http://mysite.verizon.net/vzeo1xr3/
> 
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> 
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