[BioC] selecting probe set from expression matrix
James MacDonald
jmacdon at med.umich.edu
Sat Feb 26 06:39:08 CET 2005
exprs(rm.data)[c("217523_at", "212063_at","212014_x_at"),]
HTH,
Jim
James W. MacDonald
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623
>>> Srinivas Iyyer <srini_iyyer_bio at yahoo.com> 02/25/05 5:43 PM >>>
dear list,
I generated expressions for a study in the following
way.
rm.data <- justRMA()
ex.data <- exprs(rm.data)
Now I want to select 217523_at, 212063_at,
212014_x_at.
How can I select these probesets.
> dim(data)
[1] 22283 158
2 question: how do I know data is which type of
object.
thank you
srini
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