[BioC] GFF3 format from ucsc

[Sean Davis]

Thanks, Malcolm.

Looks good--I'll give it a whirl.

Sean


1On 8/15/05 6:52 PM, "Cook, Malcolm" <MEC at Stowers-Institute.org> wrote:

> hmmm
> 
> http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1088304 refers
> to psl2gff which can be found at
> http://lgsun.grc.nia.nih.gov/geneindex4/download.html
> 
> 
> -----Original Message-----
> From: bioconductor-bounces at stat.math.ethz.ch
> [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Sean Davis
> Sent: Monday, August 08, 2005 5:45 AM
> To: Bioconductor
> Subject: [BioC] GFF3 format from ucsc
> 
> 
> Just wondering if anyone knew of code to take a ucsc Genome Browser
> tab-delimited file obtained via download and converting it to GFF3
> format?
> 
> Thanks,
> Sean
> 
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