[BioC] Preprocessing affymetrix data
ingunn.berget at umb.no
Tue Aug 9 13:42:29 CEST 2005
This is more of a theory/litterature question than use of BioC.
I know there are many different methods for quality control and
preprocessing of affymetrix data, some use the mismatch probes, others
don't. Does anybody know about reviews or comparative studies that compare
the different methods and how they perform on data. A quick view of the
bioconductor packages indicate that there are at least 5 packages that can
be used for preprocessing of affymetrix data, how much do they differ?
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