[BioC] Quantile normalization without using affyBatch
bolstad at stat.berkeley.edu
Tue Apr 19 20:04:57 CEST 2005
> I have extracted codes from gcrma and the hacked version works fine for
> background correction and affinity adjustment. I run into trouble, however,
> when I try to do quantile normalization.
> The method "normalize" takes an affyBatch object but I am working with a
> matrix of numbers. I wonder if there is any work around or other methods I
> can use.
normalize.quantiles() operates directly on a matrix by quantile
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