[BioC] estrogen vignette

[Wolfgang Huber]

Hi Adele,

where did you get the source package from? At some point, there were
problems building the PDF file of the vignette automatically from the
source using "R CMD build". But it should always work to run R, change
into the inst/doc directory of the package, and say

  Sweave("estrogen.Rnw")

then go into a shell and say

  pdflatex estrogen

The only other style file that is needed is bioCexercises.sty, which is in
the same directory as estrogen.Rnw, and needs to be in your TEXINPUTS
environment variable.

Anyway, I will send you the PDF file as an attachment to a separate mail.

  Enjoy,
   Wolfgang

<quote who="Adele Cutler">
> When I do:
>
>  openVignette("estrogen")
>
> Adobe Reader tells me the the file is damaged and could not be repaired. I
> tried downloading estrogen from source, and found the estrogen.Rnw file,
> but
> although I can successfully create estrogen.tex, I cannot figure out how
> to
> access the appropriate style files (yes, I copied Sweave.sty, but still no
> luck). I'm sure I can *eventually* figure this out, but meanwhile, does
> anyone happen to have a working version of the estrogen vignette, by
> Robert
> Gentleman and Wolfgang Huber?
>
> Thanks!
> Adele
>
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-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Http:  www.dkfz.de/abt0840/whuber