[BioC] GO: makeGOGraph Error in FUN(X[[1]], ...) : couldn't find function "convertRadius"

Saurin Jani saurin_jani at yahoo.com
Thu Oct 21 22:59:02 CEST 2004


Hi,

I am using R-2.0 with develOK=TRUE on Linux Fedora
Core 2 version.

When I do makeGOGraph: 

> gGOCC <- makeGOGraph(myUNQLL,"CC");
> plot(gGOCC);
Error in FUN(X[[1]], ...) : couldn't find function
"convertRadius"

> traceback();
8: FUN(X[[1]], ...)
7: lapply(AgEdge(x), function(x, rad, edgemode, ur,
attrs) {
       if (!is(x, "AgEdge"))
           stop(paste("Class:", class("AgEdge")))
       rad <- convertRadius(rad, ur)
       lines(x, len = (rad/3), edgemode = edgemode,
attrs = attrs)
   }, rad, edgemode(x), ur, edgeAttrs)
6: .local(x, y, ...)
5: plot(g, xlab = xlab, ylab = ylab, main = main, sub
= sub)
4: plot(g, xlab = xlab, ylab = ylab, main = main, sub
= sub)
3: .local(x, y, ...)
2: plot(gGOCC)
1: plot(gGOCC)


Please let me know, if anyone had same problem.

Thank you,
Saurin



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