[BioC] GO: makeGOGraph Error in FUN(X[[1]],
...) : couldn't find function "convertRadius"
Saurin Jani
saurin_jani at yahoo.com
Thu Oct 21 22:59:02 CEST 2004
Hi,
I am using R-2.0 with develOK=TRUE on Linux Fedora
Core 2 version.
When I do makeGOGraph:
> gGOCC <- makeGOGraph(myUNQLL,"CC");
> plot(gGOCC);
Error in FUN(X[[1]], ...) : couldn't find function
"convertRadius"
> traceback();
8: FUN(X[[1]], ...)
7: lapply(AgEdge(x), function(x, rad, edgemode, ur,
attrs) {
if (!is(x, "AgEdge"))
stop(paste("Class:", class("AgEdge")))
rad <- convertRadius(rad, ur)
lines(x, len = (rad/3), edgemode = edgemode,
attrs = attrs)
}, rad, edgemode(x), ur, edgeAttrs)
6: .local(x, y, ...)
5: plot(g, xlab = xlab, ylab = ylab, main = main, sub
= sub)
4: plot(g, xlab = xlab, ylab = ylab, main = main, sub
= sub)
3: .local(x, y, ...)
2: plot(gGOCC)
1: plot(gGOCC)
Please let me know, if anyone had same problem.
Thank you,
Saurin
More information about the Bioconductor
mailing list