[BioC] Running justRMA on .CEL files in another directory

Adaikalavan Ramasamy ramasamy at cancer.org.uk
Thu May 27 03:17:04 CEST 2004


You could need setwd() or list.files() function as in

ReadAffy( filenames=list.files(path="/some/where/else", pattern=".CEL&")
)

What is PLIER ?

On Thu, 2004-05-27 at 01:49, PARK,CHRISTOPHER CHANGSUN wrote:
> Hi all,
> 
> I was wondering if anyone knows how to normalize .CEL files that are not
> contained in the current working directory.
> 
> Also, does anyone know if it is possible to normalize using PLIER in R?
> 
> Thanks for all of your help,
> 
> Chris
> 
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