[BioC] single channel analisis w/limma

Wed May 19 00:26:06 CEST 2004

Hi!

I am trying to use Single Channel Analysis of Two-Color
Microarrays using limma. This topic is briefly discussed in limmaGui
and I have some dificulties using intraspotCorrelation. Could somebody
give me an example that help me to understand what is the design matrix to
be used in intraspotCorrelation (the description of this matrix in the
intraspotCorrelation help does not agree with the error message
about the dimension of design matrix), or some reference....

Thanks in advance

-- 
Mayte Suarez Farinas
The Rockefeller University
1230 York Avenue, Box 212
New York, NY 10021
phone: 1-212-327-8186
fax:   1-212-327-7422