[BioC] single channel in limma...

Mayte Suarez-Farinas mayte at babel.rockefeller.edu
Sat May 15 22:52:19 CEST 2004


I am trying to use Single Channel Analysis of Two-Color 
Microarrays using limma. This topic is briefly discussed in limmaGui
and I have some dificulties using intraspotCorrelation. Could somebody 
give me an example that help me to understand what is the design matrix to 
be used in intraspotCorrelation (the description of this matrix in the 
intraspotCorrelation help does not agree with the error message
about the dimension of design matrix), or some reference....

Thanks in advance

Mayte Suarez Farinas
The Rockefeller University
1230 York Avenue, Box 212
New York, NY 10021
phone: 1-212-327-8186
fax:   1-212-327-7422

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