[BioC] justRMA segmentation fault when calculating expr.
ulask at bu.edu
Thu Dec 2 05:18:35 CET 2004
I know that this has been reported before but I haven't seen any solution.
I have been consistently getting segmentation faults whenever I use
justRMA with a cdf environment other than the standard affy cdf
environments (for instance hgu133).
I have tried using my own alt cdf environments and Laurent Gautiers'
altcdfenvs at "http://www.cbs.dtu.dk/staff/laurent/download/maprefseq/"
Everything goes fine until the calculation of expression. I have tried
with both destructive = TRUE and destructive = FALSE (rma_c_complete
vs. rma_c_complete_copy), the fault persists.
When I use the default affy environment it works fine.
Did anyone experience such a thing?
I am using R 2.0, and the latest version of affy.
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