[BioC] GO annotation problem
Mayte Suarez-Farinas
mayte at babel.rockefeller.edu
Thu Apr 22 21:56:05 CEST 2004
Hi,
I have been using Annotations tools without problems but I just realized
some days ago that my HTML outputs have the GO column empty. I reinstalled
both devel and release version of Annotations (libName=Annotation) and it
happend with both. Here is the code, for example:
library(annaffy)
library(affy)
load('mydata')
anncols<-aaf.handler()[c(1:4,7:8, 12:13)]
anntable<-aafTableAnn(geneNames(mydata.gcrma)[1:100],'hgu133a',anncols)
saveHTML(anntable[1:100],'lixo.html')
Does somebody have any idea what it is going on ? Please!
platform i686-pc-linux-gnu
arch i686
os linux-gnu
system i686, linux-gnu
status beta
major 1
minor 9.0
year 2004
month 03
day 22
language R
--
Mayte Suarez Farinas
The Rockefeller University
1230 York Avenue, Box 212
New York, NY 10021
phone: 1-212-327-8186
fax: 1-212-327-7422
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