[BioC] R and ARB
Kurt Sys
Kurt.Sys at UGent.be
Wed Sep 10 18:24:20 MEST 2003
Hi all,
I'm using R and ARB both for a while right now. I'm programming some functions
to do phylogenetic microarray analysis. As far as I know, there are no packages
for (microarray) probe design in BioConductor nor for phylogenetic microarray
analysis.
I just wondered if anyone feels like helping me making ARB more accessible from
R, e.g. for the reading the phylogeny (without exporting data), or even better,
using the PT_SERVER from R. This would make it possible to use ARB from an R
interface, and even better, from a web interface, doing all analysis. This would
be of great help for our lab, for internal use, but I'm sure many other would
benefit from this possibility to do almost 'everything' (from microarray probe
design up to microarray analysis) using R.
It would be a great step to have one large system for a complete (phylogenetic)
microarray design and analysis. So, are there people out here who are willingly
to help me out with this?
tnx,
Kurt.
More information about the Bioconductor
mailing list