[BioC] Limma & Imagene
cv.vc
cv.vc at libero.it
Mon Oct 27 13:37:06 MET 2003
I use Imagene 4.0 and Limma R package.
My source file are into R directory ... and this is my R shell:
> library(limma)
>
YourSample<-read.table("TargetsSampleTarget.txt",header=TRUE,sep="\t",as.is=
TRUE)
> YourSample
SlideNumber FileNameCy3 FileNameCy5 Cy3 Cy5
1 1 1.txt 2.txt treated untreated
2 2 3.txt 4.txt treated untreated
3 3 5.txt 6.txt treated untreated
> RG<-read.maimages(slides, source="imagene")
Error in match.arg(source, c("spot", "spot.close.open", "genepix",
"quantarray")) :
ARG should be one of spot, spot.close.open, genepix, quantarray
What is the problem? Thanks
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