[BioC] Difference between the analysis of cDNA, spotted oligo arrays and comparative genomics hybridization?

[Jean Yee Hwa Yang]

Hi Fai,

marray* packages are suited for 2-color spotted arrays whether the spots
are long-oligo or cDNA.

Cheers

Jean

On Mon, 17 Nov 2003, Yuk Fai Leung wrote:

> Hi there, 
>  
> Is it suitable to use the libraries for cDNA analysis (e.g. marrayNorm,
> marrayPlots, marrayTools) to perform low level analysis on spotted oligo
> arrays (e.g. MWG, Qiagen) or comparative genomics hybridization data? 
> Thanks!
>  
> Fai
> ________
> Yuk Fai Leung
> Bauer Center for Genomics Research
> Harvard University
> 7 Divinity Avenue
> Cambridge, MA 02138
> Tel: 617-496-7134
> Fax: 617-495-2196
> email:  <mailto:yfleung at cgr.harvard.edu> yfleung at cgr.harvard.edu;
> <mailto:yfleung at genomicshome.com> yfleung at genomicshome.com
> URL:  <http://genomicshome.com> http://genomicshome.com
>  
>  
> 
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