[BioC] Milan Package

[John Zhang]

I could install Milan_1.0.0.tar.gz without any problem. Was your path right?

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>Subject: [BioC] Milan Package
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>Hi All,
>
>I am having problems installing the Milan package whether I try to install 
using R CMD or I try to install from within my R session...
>
>>From the command line, I get
>$ R CMD INSTALL ./Rpackages/Milan_1.0.0.tar.gz
>* Installing *source* package 'Milan' ...
>** R
>** data
>** inst
>ERROR: installing package DESCRIPTION failed
>
>>From within my R session..
>I get loads of these..
>WARNING: ignoring environment value of R_HOME
>/usr/lbiosoft/lib/R/bin/Rcmd: /usr/lbiosoft/lib/R/bin/Rcmd: No such file or 
directory
>
>And at the end I get...
>Warning messages:
>1: Installation of package ellipse had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>2: Installation of package multtest had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>3: Installation of package bioclabs had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>4: Installation of package cluster had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>5: Installation of package e1071 had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>6: Installation of package randomForest had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>7: Installation of package affy had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>8: Installation of package Milan had non-zero exit status in: 
installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
>
>finally I get...
>> library(Milan)
>Error in library(Milan) : This is not a valid package -- no DESCRIPTION exists
>
>ANy help would be gratefully received!
>
>Thanks
>
>Claire
> 
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Jianhua Zhang
Department of Biostatistics
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084