[BioC] Hist in affy

[Laurent Gautier]

I put the fix in the release branch a couple of hours ago.
It will be in the version 28 of 1.2 (when the build script
will do it).

L.


On Wed, Jun 11, 2003 at 10:57:36PM -0400, Rafael A. Irizarry wrote:
> this is a bug. 
> 
> the line
>  matplot(all.x, all.y, ylab=ylab, xlab=xlab, ...)
> should be
>  matplot(all.x, all.y, ylab=ylab, xlab=xlab, type=type, ...)
> 
> in the function plotDensity.
> 
> thanks for the report.
> 
> 
> On Wed, 11 Jun 2003, James MacDonald wrote:
> 
> > Using the Win version of R 1.7.0 and Affy 1.2.14, I was able to modify
> > the hist function to plot lines rather than numbers using a command like
> > this
> > 
> > hist(abatch, type="l", lty=1, lwd=2)
> > 
> > Now with R 1.7.1beta and Affy 1.2.27, this doesn't replace the numbers
> > with lines. I can sort of emulate the lines by cranking the number size
> > down with cex=0.1, but I really prefer the lines for making clear
> > plots.
> > 
> > So, is this due to a change in Affy, or is this an R 1.7.1beta thing?
> > If it is affy, is it still possible to draw lines rather than the
> > numbers?
> > 
> > TIA,
> > 
> > Jim
> > 
> > 
> > 
> > James W. MacDonald
> > UMCCC Microarray Core Facility
> > 1500 E. Medical Center Drive
> > 7410 CCGC
> > Ann Arbor MI 48109
> > 734-647-5623
> > 
> > _______________________________________________
> > Bioconductor mailing list
> > Bioconductor at stat.math.ethz.ch
> > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor
> >
> 
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