[BioC] Invalid "marrayInfo" object

[Jean Yee Hwa Yang]

Hi Rob,

There is a bug, please download the version marrayClass version 1.2.1
at
http://www.bioconductor.org/repository/devel/package/html/marrayClasses.html

Jean

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 Jean Yee Hwa Yang			 jean at biostat.ucsf.edu
 Division of Biostatistics,		   Tel: (415) 476-3368
 University of California,		   Fax: (415) 476-6014
 500 Parnassus Avenue, MU 420-W,  San Francisco, CA 94143-0560
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

On Mon, 28 Jul 2003, Rob Dunne wrote:

> 
> 
> Hi list,
>     on a new installation of R (1.7.1) I am getting an
> error on stuff that used to work. This reproduces it
> with the zebrafish example
> 
> 
> options(CRAN = "http://mirror.aarnet.edu.au/pub/CRAN/")
> update.packages()
> source("http://www.bioconductor.org/getBioC.R")
> getBioC()
> #all new installation
> 
> 
> library(marrayInput)
> datadir <- system.file("data", package="marrayInput")
> 
> >  swirl.gnames <- read.marrayInfo(file.path(datadir, "fish.gal"),
> +                                      info.id=4:5, labels=5, skip=21)
> Error in validObject(.Object) : Invalid "marrayInfo" object: 
> Invalid object for slot "maInfo" in class "marrayInfo": 
> got class "NULL", should be or extend class "data.frame"
> 
> 
> 			    any ideas?
> 
> 					bye
> 					rob
> 
> 
> platform i686-pc-linux-gnu
> arch     i686
> os       linux-gnu
> system   i686, linux-gnu
> status
> major    1
> minor    7.1
> year     2003
> month    06
> day      16
> language R
> 
> -- 
> Rob Dunne         Fax: +61 2 9325 3200     Tel: +61 2 9325 3263
> CSIRO Mathematical and Information Sciences     +61 2 9325 3100
> Locked Bag 17, North Ryde, New South Wales, Australia, 1670         
> http://matilda.vu.edu.au/~dunne  Email: Rob.Dunne at csiro.au
> 
>         Java has certainly revolutionized marketing and litigation.
> 
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