[BioC] SMD Raw Data -> marrayRaw Import

[Jean Yee Hwa Yang]

Hi Colin,

There isn't any function for reading SMD gene and layout information at
the moment.  However if the corresponding layout and gene information from
SMD data is a gal file you can try using the function read.Galfile.  
Alternatively, you can modified the code slightly to customize it for SMD
file.

Cheers

Jean

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 Jean Yee Hwa Yang			 jean at biostat.ucsf.edu
 Division of Biostatistics,		   Tel: (415) 476-3368
 University of California,		   Fax: (415) 476-6014
 500 Parnassus Avenue, MU 420-W,  San Francisco, CA 94143-0560
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

On Mon, 7 Jul 2003, Colin A. Smith wrote:

> Has anyone done work automating the process of importing SMD raw data 
> into marrayRaw objects? The read.SMD() function helps a bit. However, 
> creation of the constitutive  marrayLayout and marrayInfo objects is 
> still a manual process.
> 
> Just thought I'd ask before I create my own solution.
> 
> Thanks.
> 
> -Colin
> 
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