[Bioc-sig-seq] questions about GenomicFeatures

Dario Strbenac D.Strbenac at garvan.org.au
Thu Jun 30 02:00:08 CEST 2011


Those numbers are Entrez IDs. You can get their gene symbols from one of the Bioconductor databases.

library(org.Hs.eg.db)
entrezToSymbols <- as.list(org.Hs.egSYMBOL)
> head(entrezToSymbols)
$`1`
[1] "A1BG"

$`10`
[1] "NAT2"

$`100`
[1] "ADA"

$`1000`
[1] "CDH2"

$`10000`
[1] "AKT3"

$`100008586`
[1] "GAGE12F"

--------------------------------------
Dario Strbenac
Research Assistant
Cancer Epigenetics
Garvan Institute of Medical Research
Darlinghurst NSW 2010
Australia



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