[Bioc-sig-seq] novoalign format support

[Wu, Xiwei]

Hi, all,

Is there any plan to support Novoalign format in readAligned function in
the ShortRead package? We have been using it as a standard tool, given
its alignment accuracy, but we have to convert it to MAQ format to use
with readAligned function so far. 

Also, when Rsamtools will become available in the development version of
R? 

Xiwei Wu, Ph.D.
Associate Director, Bioinformatics Core
Assistant Research Professor
Department of Molecular Medicine
Beckman Research Institute
City of Hope



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