[Bioc-devel] C++ compiler error on kunpeng2 ?

[Katja Danielzik]

Dear all,

i have noticed that my package "MetaboDynamics" which employs stan 
models ,that are pre-compiled to C++ during installation, fails to 
install on kunpeng2 (and only there) with the following error message:

/usr/bin/ld: cannot find -ltbbmalloc: No such file or directory
collect2: error: ld returned 1 exit status
make: *** [/home/biocbuild/R/R/share/make/shlib.mk:10: MetaboDynamics.so] Error 1
ERROR: compilation failed for package ‘MetaboDynamics’
* removing ‘/home/biocbuild/R/R-devel_2025-02-19/site-library/MetaboDynamics’

The same error exists for the packages "IgGeneUsage" and "ClustIRR" 
which also contain stan models that are compiled to C++.

Might it be that the C++ compiler has an error or something is not 
installed properly on the kunpeng2 VM?

Best,

Katja Danielzik

-- 
PhD Student
AG Bioinformatics and Computational Biophysics
University of Duisburg-Essen
Tel: +49 201 183 4265
e-mail:katja.danielzik using uni-due.de

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