[Bioc-devel] Question relating to extending a class and inclusion of data

Hervé Pagès hp@ge@@on@g|thub @end|ng |rom gm@||@com
Thu May 23 21:16:53 CEST 2024


I replied the wrong email sorry. Please ignore.

On 5/23/24 11:40, Hervé Pagès wrote:
>
> Ok I downloaded the SecureLink Connection Manager (file 
> connection-manager.run) on my Linux laptop (got a big warning from 
> Chrome that this kind of file is dangerous, I found this pretty ironic).
>
> Then I started it with
>
>   bash connection-manager.run
>
> (you have to kind of figure out these things by yourself)
>
> That displays a small popup window that says:
>
>     securelink.partners.org
>
>     Connected to the server
>
> And now what?
>
> The page at https://securelink.partners.org/ also says that I'm 
> connected to kraken.dfci.harvard.edu but how do I actually access that 
> machine?
>
> Thanks for your help.
>
>  H.
>
> On 5/22/24 16:29, Hervé Pagès wrote:
>>
>> On 5/22/24 02:16, Vincent Carey wrote:
>>
>>>     ...
>>>
>>>     > Q4: Do you think a separate ExperimentData package satisfying
>>>     the specifications laid out in Background 2 is warranted? This
>>>     could be included in a future version with
>>>     SummarizedExperiment/MetaboExperiment support.
>>>     It depends on the size of the data. For a software package, we
>>>     limit the
>>>     size of the source tarball to 5G. So if you're going to exceed that
>>>     limit then the datasets need to go in an experiment data package.
>>>
>>>
>>> Not 5G.  Compressed tarball size may not exceed 5MB. See 
>>> https://contributions.bioconductor.org/general.html, sec 3.2.5.
>>
>> oops! Yes of course. Thanks for the catch!
>>
>> -- 
>> Hervé Pagès
>>
>> Bioconductor Core Team
>> hpages.on.github using gmail.com
> -- 
> Hervé Pagès
>
> Bioconductor Core Team
> hpages.on.github using gmail.com

-- 
Hervé Pagès

Bioconductor Core Team
hpages.on.github using gmail.com

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