[Bioc-devel] Question relating to extending a class and inclusion of data

Hervé Pagès hp@ge@@on@g|thub @end|ng |rom gm@||@com
Thu May 23 20:40:28 CEST 2024


Ok I downloaded the SecureLink Connection Manager (file 
connection-manager.run) on my Linux laptop (got a big warning from 
Chrome that this kind of file is dangerous, I found this pretty ironic).

Then I started it with

   bash connection-manager.run

(you have to kind of figure out these things by yourself)

That displays a small popup window that says:

     securelink.partners.org

     Connected to the server

And now what?

The page at https://securelink.partners.org/ also says that I'm 
connected to kraken.dfci.harvard.edu but how do I actually access that 
machine?

Thanks for your help.

  H.

On 5/22/24 16:29, Hervé Pagès wrote:
>
> On 5/22/24 02:16, Vincent Carey wrote:
>
>>     ...
>>
>>     > Q4: Do you think a separate ExperimentData package satisfying
>>     the specifications laid out in Background 2 is warranted? This
>>     could be included in a future version with
>>     SummarizedExperiment/MetaboExperiment support.
>>     It depends on the size of the data. For a software package, we
>>     limit the
>>     size of the source tarball to 5G. So if you're going to exceed that
>>     limit then the datasets need to go in an experiment data package.
>>
>>
>> Not 5G.  Compressed tarball size may not exceed 5MB. See 
>> https://contributions.bioconductor.org/general.html, sec 3.2.5.
>
> oops! Yes of course. Thanks for the catch!
>
> -- 
> Hervé Pagès
>
> Bioconductor Core Team
> hpages.on.github using gmail.com

-- 
Hervé Pagès

Bioconductor Core Team
hpages.on.github using gmail.com

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