[Bioc-devel] Access rights for simPIC repository, git fetch error

Kern, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Thu Mar 7 13:17:54 CET 2024


I would either add a new ssh key or check out the FAQ section at
http://contributions.bioconductor.org/git-version-control.html#faq
specifically, #13, 14, and 15



Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Sagrika Chugh <sagrika.chugh using gmail.com>
Sent: Thursday, March 7, 2024 7:13 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Access rights for simPIC repository, git fetch error

Hi Bioconductor team,

I submitted a package called "simPIC" recently and want to make some
changes as the reviewer suggested.

I am following the instructions as mentioned here
https://secure-web.cisco.com/1ewkpsBTVEAXYF9LrstZgLo9sVMgZfeGHQQMQvWNGE5KRlrE-pr8Gi5qNnfQyFB7NpM1I9kQl2cyi7ggw9RJcVofNtzfhflM4z6xQ2E-QqD5Jpugpe529jKmTiNPqrMkvJX4R-stHfTlZKixFtDFYBtTBrQzLazRKcGGaEQeBgqVCRemnNK3adhUiLMrRXugyWOB_TYHdB1eL7-_vGPQLX6dWKfbLWnNoCqVdhiL_zuyExUT3bj0mGDaT4-Tpo55FZO1HDz38kATxMSlH3JwHz3-U4hJ2jA6QyojDCw_tRrO29fwPBjjrgrWfrGCC8vwb/https%3A%2F%2Fcontributions.bioconductor.org%2Fgit-version-control.html%23new-package-workflow

But I get an error when i try to fetch using git fetch --all

git fetch --all

Fetching origin

Fetching upstream

git using git.bioconductor.org: Permission denied (publickey).

fatal: Could not read from remote repository.


Please make sure you have the correct access rights

and the repository exists.

error: could not fetch upstream

This is my remote status:

git remote -v

origin https://secure-web.cisco.com/13QKTOQsJtM0rHg-rPur8C-KbOLjZuBodt_Wi7RdUlt0lh3HSzopRBc4qodK_MwsnfA6_icjbc3zD_yt-qqHGcloj8ExKijOCVyJHBXH0fPHDMA1d-s0YGmNTdw0MYU_DEDB_szta220kx0oiWJadQAScL8qrkNOO66u50SdROF0bclo0t-mla0K5Ve6Y28PgN-P-u231vc3aB2WAdhRj8MyLbtypf_lLFTL6XpvehAA2cVgG4UID9Eb9an3wcRYgt_Xgq5P-wi0KG94kAtYWl_PAJGNcgxtVphbl_yUQ-RIVoRAqxQkkeGEebjvAcqLE/https%3A%2F%2Fgithub.com%2Fsagrikachugh%2FsimPIC (fetch)

origin https://secure-web.cisco.com/13QKTOQsJtM0rHg-rPur8C-KbOLjZuBodt_Wi7RdUlt0lh3HSzopRBc4qodK_MwsnfA6_icjbc3zD_yt-qqHGcloj8ExKijOCVyJHBXH0fPHDMA1d-s0YGmNTdw0MYU_DEDB_szta220kx0oiWJadQAScL8qrkNOO66u50SdROF0bclo0t-mla0K5Ve6Y28PgN-P-u231vc3aB2WAdhRj8MyLbtypf_lLFTL6XpvehAA2cVgG4UID9Eb9an3wcRYgt_Xgq5P-wi0KG94kAtYWl_PAJGNcgxtVphbl_yUQ-RIVoRAqxQkkeGEebjvAcqLE/https%3A%2F%2Fgithub.com%2Fsagrikachugh%2FsimPIC (push)

upstream git using git.bioconductor.org:packages/simPIC.git (fetch)

upstream git using git.bioconductor.org:packages/simPIC.git (push)


ssh -T git using git.bioconductor.org

git using git.bioconductor.org: Permission denied (publickey).


My Bioconductor git credentials account is already active and I can see
that I have access to my package there but there seems to be some issue
with the keys or permission.

Any advice would be greatly appreciated.

Thanks,
Sagrika

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