[Bioc-devel] Single Package Builder failing to detect subscription to the Bioc-devel mailing list

[Kern, Lori]

You shouldn't have to sign up again. There was a bug in the code that should be fixed in the latest push to BiocCheck version 1.39.12

https://github.com/Bioconductor/BiocCheck/issues/205
[https://opengraph.githubassets.com/ab6db7795256e2a9e1760a2a42b407dd2af58f3ce9960f3072377117a3801dae/Bioconductor/BiocCheck/issues/205]<https://github.com/Bioconductor/BiocCheck/issues/205>
bioc-devel mailing list check still not always accurate · Issue #205 · Bioconductor/BiocCheck<https://github.com/Bioconductor/BiocCheck/issues/205>
I can confirm the single package builder is using version 1.39.10 See mailing list https://stat.ethz.ch/pipermail/bioc-devel/2024-January/020119.html for email = "richardheery using gmail.com". I can con...
github.com




Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Boyi Guo <boyi.guo.work using gmail.com>
Sent: Wednesday, January 10, 2024 2:53 PM
To: Kern, Lori <Lori.Shepherd using RoswellPark.org>
Cc: Richard Heery <richardheery using gmail.com>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Single Package Builder failing to detect subscription to the Bioc-devel mailing list

Hi,

I had the same problem (https://bioconductor.org/spb_reports/tpSVG_buildreport_20240109095309.html<https://secure-web.cisco.com/17WcfrGBiAYEYr5NOi5pUrQrU1hC_SXJiUwT-1FXzztXeAu4fuD0rYMmRGGJ3uisEslbV1knb6VpLqwBHcKE18ZozauDI7JQUUKX-Z9Mmzb1DVB7OxdfLPGBa2qC4rpFQeznZRc0JVS3-4rny_sZQWkVo896gpQXv4JTu-b8Kr3UTtH4dcL4yFdMNx5m4moYrm5nGJl3NKFBC54RPvOa0P2RGdOQb5S8R8WYYOHMFNmgr8aR7M14GKrPvcr5fGR0TsFpYn3i3F4v2Ox_3YH8mz_YcmlsEp8Y6f4TjWMDrwQYT5z34XnxOoUlviDMS4QNE/https%3A%2F%2Fbioconductor.org%2Fspb_reports%2FtpSVG_buildreport_20240109095309.html>).

* Checking for bioc-devel mailing list subscription...
  * ERROR: Subscribe to the Bioc-devel mailing list by going to https://stat.ethz.ch/mailman/listinfo/bioc-devel<https://secure-web.cisco.com/1B-ujEW5G7_PxldFt9QOipEwKnjTDrDgnSdkN4Q0Sc7phvs4RaaxAscxtvbF3mu_Q1_bLUDDe8sO6EirtfSEDHkDIn0DCumfluJGJbW2q78hfXTxFyLvdlYMJYe4pAhxDzcpUOjhP9Z8jJnN6QQhgdl7NS00Zih7olJIjFRBsZBhSJcNuGjkR7MCB8Mk-JuZnJp3kJS0qjesg4CcGOsBFyt6y6KgSwSttx_6BFgO5vZnaBGSWTS61wDQssQqMvddMRoLpwyl7j92amaW91E-i2BB4ukcY26t8pLM1DyRDjJAiOFIYl83us7xf5tF0o1Z9/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel>

In my experience, signing up the mailing list again, even though I already signed up previously, resolved that error.
I am not sure if this practice should be advised, and I did receive an auto email with subject line "Mailman privacy alert", telling me that I've already signed up.


Thanks.


Best,

Boyi

On Mon, Jan 8, 2024 at 7:49 AM Kern, Lori via Bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>> wrote:
I can confirm that this email is subscribed.  We can open an issue on BiocCheck to investigate this more.  In the meantime I will comment on your submission issue to ignore the error for now.



Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> on behalf of Richard Heery <richardheery using gmail.com<mailto:richardheery using gmail.com>>
Sent: Sunday, January 7, 2024 7:17 AM
To: bioc-devel using r-project.org<mailto:bioc-devel using r-project.org> <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
Subject: [Bioc-devel] Single Package Builder failing to detect subscription to the Bioc-devel mailing list

Hi all,

My package submission is repeatedly failing due to an error saying I am not
subscribed to the Bioc-devel mailing list, even though I am subscribed
using this email. This is the same email I have in the DESCRIPTION file and
also as my git user.email both globally and locally in the repository. Any
ideas what could be causing this?

Cheers,

Richard

        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel using r-project.org<mailto:Bioc-devel using r-project.org> mailing list
https://secure-web.cisco.com/1bwFRglsu5TtZVWWu4cPjyLXP4fcP2PsmUHOL4HxHAZSur69I7deMtKaMIKT3SneN_1ejbpIQPconydf00C1gZ48n6-mHywHpyOfldW39t51N8saYvfOxUxOYVZYINzSIAxhqFIyAy0XSsKbt0FpUiPukL6aFscuh3xIFCAr7htgmNnWVGezwZi6W4k8eU3MiGyfjXMH2QTG3oO2hD-GVTF38NwebfCMJtsdtmGpZrzqmYwrfUQtro2n5uEYIIJ4I5Gs8nrOuI9PIGHpNcZiFvYDbiqkyBeI4NBeX9eqa03Te4QBVNSqOQ2TTw3LJmu16/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel using r-project.org<mailto:Bioc-devel using r-project.org> mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel<https://secure-web.cisco.com/1B-ujEW5G7_PxldFt9QOipEwKnjTDrDgnSdkN4Q0Sc7phvs4RaaxAscxtvbF3mu_Q1_bLUDDe8sO6EirtfSEDHkDIn0DCumfluJGJbW2q78hfXTxFyLvdlYMJYe4pAhxDzcpUOjhP9Z8jJnN6QQhgdl7NS00Zih7olJIjFRBsZBhSJcNuGjkR7MCB8Mk-JuZnJp3kJS0qjesg4CcGOsBFyt6y6KgSwSttx_6BFgO5vZnaBGSWTS61wDQssQqMvddMRoLpwyl7j92amaW91E-i2BB4ukcY26t8pLM1DyRDjJAiOFIYl83us7xf5tF0o1Z9/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel>


This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
	[[alternative HTML version deleted]]