[Bioc-devel] Check time on macOS (MIRit)

Jacopo Ronchi j@copo@ronch| @end|ng |rom un|m|b@|t
Wed Feb 7 12:34:10 CET 2024


Dear Vincent, thanks for your answer. So, at least for now, can I ignore
the warning on macOS for the submission of MIRit?

Il mer 7 feb 2024, 12:26 Vincent Carey <stvjc using channing.harvard.edu> ha
scritto:

> Thanks Jacopo.  You shouldn't have to struggle.  We are aware of
> disparities of platform
> performance and are working to improve the build process.  It will take
> time.  I believe that
> achievement of acceptable timings on the linux platform should be the key
> goal at
> this time.
>
> On Wed, Feb 7, 2024 at 5:18 AM Jacopo Ronchi <jacopo.ronchi using unimib.it>
> wrote:
>
>> Dear developers,
>>
>> I am struggling to reduce R CMD check times for my package, MIRit, on
>> macOS. The check on linux takes 4 minutes, while on macOS it needs 9/10
>> minutes. I have severely reduced the size of examples and tests, which now
>> use smaller datasets and cached resources.
>>
>> On linux, unit tests require 30 seconds more or less, and examples 40
>> seconds. On the other hand, macOS tests take 100 seconds, and 75 for the
>> examples. The issue is that sometimes the check runs in less than 10
>> minutes, sometimes it needs a little bit more.
>>
>> However I am out of ideas on how to further reduce examples and tests...
>> The vignette is really extensive, but since SPB uses the "--no-vignette"
>> option this should not influence heavily on this behavior, at least to my
>> understanding.
>>
>> Sorry for bothering you,
>> Best regards,
>> Jacopo
>>
>>         [[alternative HTML version deleted]]
>>
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