[Bioc-devel] "scry" build report error

[Jennifer Wokaty]

We removed resource EH1524 from the cache so it could be redownloaded. scry's report does not show errors today: https://bioconductor.org/checkResults/devel/bioc-LATEST/scry/.

Jennifer Wokaty (they/them)

Waldron Lab at CUNY SPH
Bioconductor Core Team
________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Kelly Street <street.kelly using gmail.com>
Sent: Tuesday, September 26, 2023 6:38 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] "scry" build report error

* This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. *

Hello all,

We are getting a strange error in the recent build report
<https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2Fscry%2F__%3B!!PxiZbSOawA!ODjhdQq9byQk5g8hrf2t2PvaVrxRgb22w8weWOe9X-Pv37m5tDdBPtVvfBU7K4HYOTOcyrD83M1PxhpqXYlAvyHVs83pkC1u%24&data=05%7C01%7Cjennifer.wokaty%40sph.cuny.edu%7Cbeea2b9769d5417e966608dbbee183b0%7C6f60f0b35f064e099715989dba8cc7d8%7C0%7C0%7C638313648038042589%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=aW6kugdegge9sKHl38xIrwOKdUoXIqmzBcj%2BY%2Fn7DE0%3D&reserved=0 > for our
package "scry" and I am wondering if anyone has encountered this issue
before. In the vignette, we use a dataset from the DuoClustering2018
package, which does not seem to have any issues, itself. However, on
palomino4, we get this error:

Error: processing vignette 'scry.Rmd' failed with diagnostics:
failed to load resource
  name: EH1524
  title: sce_full_Zhengmix4eq
  reason: unknown input format

Will Townes and I have been unable to reproduce this error locally (both on
Macs), so I'm wondering if anyone knows how we might diagnose this problem?

Thanks,
Kelly

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