[Bioc-devel] synaptome.db check error

[Anatoly Sorokin]

Dear Jennifer,

Thank you very much!

Cheers,
Anatoly

On Sat, Sep 2, 2023 at 12:49 AM Jennifer Wokaty <
Jennifer.Wokaty using sph.cuny.edu> wrote:

> Hi Anatoly,
>
> I see we got a few of these on the most recent build. No action is needed
> as the Bioconductor build system will remove the lock files on the next run
> next Wednesday.
>
> Jennifer Wokaty (they/them)
>
> Waldron Lab at CUNY SPH
> Bioconductor Core Team
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> Anatoly Sorokin <lptolik using gmail.com>
> *Sent:* Friday, September 1, 2023 6:34 AM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] synaptome.db check error
>
> * This email originates from a sender outside of CUNY. Verify the sender
> before replying or clicking on links and attachments. *
>
> Dear all,
> I've found a strange error on *nebbiolo2
> <
> https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.18%2Fdata-annotation-LATEST%2Fnebbiolo2-NodeInfo.html__%3B!!PxiZbSOawA!OxBOK7v_etZ8bAv-qRxlhci8I2O9RM1QCBFcLfhFFOwov1NvgVB9VmnJfPhHzMCVFo-5mitDjaEDAFDKYYbLP1u8YQ%24&data=05%7C01%7Cjennifer.wokaty%40sph.cuny.edu%7Ca796973f07ed49411b7808dbaad73b31%7C6f60f0b35f064e099715989dba8cc7d8%7C0%7C0%7C638291613648265413%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=v%2BwY9PvGaH64mEpbJowtFOTerNW1EJaQPaOPYmtoLPU%3D&reserved=0
> >*
> check
> server for our package synaptome.db:
>
> * installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’
> ERROR: failed to lock directory
> ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’ for modifying
> Try removing
> ‘/home/biocbuild/bbs-3.18-bioc/R/site-library/00LOCK-metaboliteIDmapping’
>
>
> What should I do to get rid of it?
> Cheers,
> Anatoly
>
>         [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel using r-project.org mailing list
>
> https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel__%3B!!PxiZbSOawA!OxBOK7v_etZ8bAv-qRxlhci8I2O9RM1QCBFcLfhFFOwov1NvgVB9VmnJfPhHzMCVFo-5mitDjaEDAFDKYYYaT7wrwQ%24&data=05%7C01%7Cjennifer.wokaty%40sph.cuny.edu%7Ca796973f07ed49411b7808dbaad73b31%7C6f60f0b35f064e099715989dba8cc7d8%7C0%7C0%7C638291613648265413%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=ShBv%2BwHsevzYnjtPL%2FFd%2BKC6714XqYagqXvvam4BOg4%3D&reserved=0
> <https://urldefense.com/v3/__https://stat.ethz.ch/mailman/listinfo/bioc-devel__;!!PxiZbSOawA!OxBOK7v_etZ8bAv-qRxlhci8I2O9RM1QCBFcLfhFFOwov1NvgVB9VmnJfPhHzMCVFo-5mitDjaEDAFDKYYYaT7wrwQ$>
>

	[[alternative HTML version deleted]]