[Bioc-devel] Vignette files causing package to exceed 5 MB size limit

[Kern, Lori]

The data is now available in the hub

> query(eh, "TumourMethData")
ExperimentHub with 4 records
# snapshotDate(): 2023-10-06
# $dataprovider: University of California San Francisco, Washington Universi...
# $species: Homo sapiens
# $rdataclass: RangedSummarizedExperiment
# additional mcols(): taxonomyid, genome, description,
#   coordinate_1_based, maintainer, rdatadateadded, preparerclass, tags,
#   rdatapath, sourceurl, sourcetype
# retrieve records with, e.g., 'object[["EH8424"]]'

           title
  EH8424 | tcga_wgbs_hg38
  EH8525 | mcrpc_wgbs_hg38
  EH8526 | cpgea_wgbs_hg38
  EH8527 | cao_esophageal_wgbs_hg19
>


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Richard Heery <richardheery using gmail.com>
Sent: Friday, October 6, 2023 12:28 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Vignette files causing package to exceed 5 MB size limit

Hi all,

My package tarball is only 4.4 MB when I build it without building the
vignettes. However, it increases to 7 MB when I build the vignettes. My
vignette is a html_document that creates several images and is 3.8 MB
uncompressed so quite large. Since my package is under the 5 MB limit
without building vignettes, would that be considered small enough to pass
or must the size of the vignettes be counted as part of the package size?

Cheers,

Richard

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