[Bioc-devel] Workflow package build all OK but no vignette and red Package propagation status LED

[James Perkins]

Thanks I didn't know about the mouseover hint! It appears that this 
package (miRBaseConverter) is failing the check on linux:

https://bioconductor.org/checkResults/3.18/bioc-LATEST/miRBaseConverter/

Leading to the red light ExpHunterSuite on the linux build only:

https://bioconductor.org/checkResults/3.18/workflows-LATEST/ExpHunterSuite/

However, what I'm not sure about - is this unavailable dependency the 
reason why the landing page for ExpHunterSuite does not show the 
vignette or source code?

https://bioconductor.org/packages/3.18/workflows/html/ExpHunterSuite.html

Or could it be another factor?

Jim

On 2023-11-13 12:08, Martin Grigorov wrote:
> Hi,
> 
> If you hover over the red LED you will see the following hint: NO,
> package depends on 'miRBaseConverter' which is not available"
> 
> Regards,
> Martin
> 
> On Mon, Nov 13, 2023 at 11:31 AM James Perkins <jimrperkins using uma.es>
> wrote:
> 
>> Hi,
>> 
>> I am the maintainer of the Workflow package ExpHunterSuite.
>> 
>> In the build report for the release branch, 3.18, my build and
>> install
>> status are green-OK.
>> 
>> However, I have a red LED for Package Propagation. How can I tell
>> what's
>> gone wrong, and how could I fix it?
>> 
>> 
> https://bioconductor.org/checkResults/3.18/workflows-LATEST/ExpHunterSuite/
>> 
>> I've had a look through the documentation and the nearest I've found
>> 
>> was: "propagation is still determined by the results of the nightly
>> builds." - but I cannot find/workout the relevant section in the
>> output
>> of the nightly build report that is related to propagation status.
>> 
>> The landing page of the package is not showing the documentation
>> (vignette etc.), or letting me download the package source.
>> 
>> 
> https://bioconductor.org/packages/3.18/workflows/html/ExpHunterSuite.html
>> 
>> I suspect this is related, because the devel version of the package
>> IS
>> showing blue propagation status, and IS showing the
>> documentation/package source etc.
>> 
>> 
> https://bioconductor.org/packages/3.19/workflows/html/ExpHunterSuite.html
>> 
>> Cheers!
>> 
>> Jim
>> 
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