[Bioc-devel] Build issue on nebbiolo2 for DEWSeq

[Hervé Pagès]

Hi Sudeep,

I don't see magrittr in any of the Depends, Imports, or Suggests field 
of DEWSeq.

Remember that any function or symbol you use from another package 
requires that you declare that package in one of these fields. In this 
case, since you only use %>% in the vignette, then you only need to put 
magrittr in the Suggests field. You don't need to import it.

However, as suggested by Kristian, why not just use R basic pipe "|>" 
instead?

Best,

H.

On 11/14/23 23:23, Biohentze wrote:
> Dear all,
>
> We are facing build issue on nebbiolo2 on our vignette for the package DEWSeq. The issue is that we use magittr pipe (%>%) in the vignette and the issue occurs only on the linux machine.
> Checks, builds and installation completes successfully on windows and mac. Here is the complete build report:https://master.bioconductor.org/checkResults/3.18/bioc-LATEST/DEWSeq/nebbiolo2-checksrc.html
>
>   Could you please look into it  ?
>
> Thank you in advance,
> Sudeep.
>
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-- 
Hervé Pagès

Bioconductor Core Team
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