[Bioc-devel] Package check error under BiocVersion 3.18

Jinjin Chen chen@j @end|ng |rom weh|@edu@@u
Sun Nov 12 04:47:53 CET 2023


Hi,

I got check error for my package after new release 3.18 of bioconductor on all 3 platforms (linux, windows and macOS). The build report shows the error like this:

Error in validObject(.Object) :
  invalid class �LogMap� object: superclass "mMatrix" not defined in the environment of the object's class

But when I check the devel BiocVersion 3.19 report, it's OK under linux OS but failed with the same error under windows and macOS.

I guess this is caused by the conflicts between Seurat and Matrix package? Could you please help me figure out how to fix this?

Thanks!

PhD student, Davis Laboratory
Bioinformatics Division
The Walter and Eliza Hall Institute of Medical Research


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