[Bioc-devel] mzR crashing R session

Neumann, Steffen @neum@nn @end|ng |rom |pb-h@||e@de
Thu Mar 16 13:24:43 CET 2023


Hi,

On Wed, 2023-03-15 at 16:18 +0000, TYLER H WINTERMUTE via Bioc-devel
wrote:
> I�m encountering the following issue when loading mzR, 
As Laurent mentioned, the warning below can safely be ignored, 
this was an issue when Rcpp changed more rapidly. 

> and my session immediately crashes.
If here you mean Segfault or other nasty surprises terminating the
session, we need more information. Also, we've seen cases of different
behaviour between rstudio sessions and bare commandline R sessions. 

Yours,
Steffen


>  I�ve followed the instructions at the GitHub wiki link, but am
> continuing to have issues. The final instruction was to send an email
> to the mailing list, which I�m doing now. Do you have any suggestions
> on fixing this issue?
> 
> Loading required package: Rcpp
> Warning: mzR has been built against a different Rcpp version (1.0.9)
> than is installed on your system (1.0.10). This might lead to errors
> when loading mzR. If you encounter such issues, please send a report,
> including the output of sessionInfo() to the Bioc support forum at
> https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fsupport.bioconductor.org%2F&data=05%7C01%7C%7C4d0b033f73e74f5f48e508db25713752%7C0934ee6c2a574efd80a9fc003defef4e%7C0%7C0%7C638144940408962856%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=Lemgo5U%2FjGB4n53AqPvvNWr%2FOKscaLJX7lC8SknpBWU%3D&reserved=0
> . For details see also
> https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fsneumann%2FmzR%2Fwiki%2FmzR-Rcpp-compiler-linker-issue&data=05%7C01%7C%7C4d0b033f73e74f5f48e508db25713752%7C0934ee6c2a574efd80a9fc003defef4e%7C0%7C0%7C638144940408962856%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=8U4UvB9QrG%2FyU0uMqjCTmpGjNsZnQ%2B962a4yrgRVD5Y%3D&reserved=0
> .
> 
> 
> Best,
> 
> Tyler
> 
> 
>         [[alternative HTML version deleted]]
> 
> _______________________________________________
> Bioc-devel using r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

-- 
Upcoming events:
* HUPO-PSI Spring workshop April 17-19 2023 in Leiden/NL
 https://psidev.info/hupo-psi-meeting-2023 (Registration open!)



---
IPB Halle                    Computational Plant Biochemistry (CPB)
Dr. Steffen Neumann          http://www.IPB-Halle.DE
Weinberg 3                   Tel. +49 (0) 345 5582 - 1470
06120 Halle                       +49 (0) 345 5582 - 0
sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409












More information about the Bioc-devel mailing list