[Bioc-devel] Error building package

ELENI ADAM e@d@m002 @end|ng |rom odu@edu
Wed Apr 12 02:55:48 CEST 2023


Hello Henrik,

Thank you very much!!

Kind Regards,
Eleni


On Thu, Apr 6, 2023 at 11:26 AM Henrik Bengtsson <henrik.bengtsson using gmail.com>
wrote:

> Hello,
>
> add 'BiocStyle' to Suggests: in your DESCRIPTION file to fix this.
>
> For details, see
> <https://stat.ethz.ch/pipermail/bioc-devel/2023-April/019573.html>
>
> /Henrik
>
> On Thu, Apr 6, 2023 at 8:12 AM ELENI ADAM <eadam002 using odu.edu> wrote:
> >
> > Dear all,
> >
> > I am the creator of the hummingbird package (
> > https://bioconductor.org/packages/devel/bioc/html/hummingbird.html ) and
> > suddenly today I noticed that the check is failing in nebbiolo1 for the
> > devel version, even though I did not make any change to the package, it
> was
> > building fine the previous days. I am not sure why this has happened?
> >
> > The error message occurring states:
> > Error(s) in re-building vignettes:
> >   ...
> > --- re-building ‘hummingbird.Rmd’ using rmarkdown
> > Error: processing vignette 'hummingbird.Rmd' failed with diagnostics:
> > there is no package called ‘BiocStyle’
> > --- failed re-building ‘hummingbird.Rmd’
> >
> > And this is only happening in the devel version of the package, which is
> > identical to the release. And only happening in nebbiolo1.
> >
> > I am also worried because this happened now and the deadline for the new
> > release is too close.
> >
> > Could you please help me?
> >
> > Thank you,
> > Eleni Adam
> > *PhD Candidate in CS*
> > *Old Dominion University*
> > *Norfolk, VA, USA*
> >
> >         [[alternative HTML version deleted]]
> >
> > _______________________________________________
> > Bioc-devel using r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

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