[Bioc-devel] Error building package

Henrik Bengtsson henr|k@bengt@@on @end|ng |rom gm@||@com
Thu Apr 6 17:26:37 CEST 2023


Hello,

add 'BiocStyle' to Suggests: in your DESCRIPTION file to fix this.

For details, see
<https://stat.ethz.ch/pipermail/bioc-devel/2023-April/019573.html>

/Henrik

On Thu, Apr 6, 2023 at 8:12 AM ELENI ADAM <eadam002 using odu.edu> wrote:
>
> Dear all,
>
> I am the creator of the hummingbird package (
> https://bioconductor.org/packages/devel/bioc/html/hummingbird.html ) and
> suddenly today I noticed that the check is failing in nebbiolo1 for the
> devel version, even though I did not make any change to the package, it was
> building fine the previous days. I am not sure why this has happened?
>
> The error message occurring states:
> Error(s) in re-building vignettes:
>   ...
> --- re-building ‘hummingbird.Rmd’ using rmarkdown
> Error: processing vignette 'hummingbird.Rmd' failed with diagnostics:
> there is no package called ‘BiocStyle’
> --- failed re-building ‘hummingbird.Rmd’
>
> And this is only happening in the devel version of the package, which is
> identical to the release. And only happening in nebbiolo1.
>
> I am also worried because this happened now and the deadline for the new
> release is too close.
>
> Could you please help me?
>
> Thank you,
> Eleni Adam
> *PhD Candidate in CS*
> *Old Dominion University*
> *Norfolk, VA, USA*
>
>         [[alternative HTML version deleted]]
>
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