[Bioc-devel] Mac ARM64 binaries available

[Ramon Diaz-Uriarte]

Dear Vincent,

On Tue, 04-October-2022, at 11:40:11, Vincent Carey <stvjc using channing.harvard.edu> wrote:
> We are not running check on ARM platform at this time.  If you want to provide a link
> to the
> package/error you are having trouble with I will have a look on my machine.

Thanks a lot. This is the link:

https://bioconductor.org/checkResults/3.16/bioc-mac-arm64-LATEST/OncoSimulR/kjohnson-buildsrc.html

To try to figure it out, I split the suspected problematic section of the vignette where things fail; the newest version of the package (as well as the former one) passed checks in the other platforms.

Nevertheless, since not passing in this platform will have no consequences, I would not like to bug you with this. Since there is no rush, I'll use trial-and-error, preparing new versions as new check results become available.


Best,


R.


> If you are
> passing
> on the other platforms there will be no consequences for remaining in the bioc
> ecosystem.
>
> On Tue, Oct 4, 2022 at 5:22 AM Ramon Diaz-Uriarte <rdiaz02 using gmail.com> wrote:
>
>  Dear All,
>
>  It is unclear to me if the deadline of 28-October-2022 for "packages passing ‘‘R
>  CMD build’’ and ‘‘R CMD check’’ without errors or warnings"
>  (https://bioconductor.org/developers/release-schedule/) also applies to this
>  platform.
>
>  Why the question? I am trying to debug an error in this platform of a package I
>  maintain but:
>
>  a) the snapshot date seems older than the snapshot date in
>  http://bioconductor.org/checkResults/devel/bioc-LATEST/ (which would
>  introduce a longer delay in verifying results of code changes)
>
>  b) results are not linked from the former page (which, I understand, is the
>  "canonical" one for checking status).
>
>  Thanks,
>
>  R.
>
>  On Tue, 27-September-2022, at 19:46:01, Jennifer Wokaty
>  <Jennifer.Wokaty using sph.cuny.edu> wrote:
>  > Mac ARM64 binaries are now available. You can view the build report at
>  > https://bioconductor.org/checkResults/3.16/bioc-mac-arm64-LATEST/.
>  >
>  > To make use of these binaries
>  >
>  > * Install R-4.2.1-arm64.pkg from CRAN at https://cran.r-project.org/bin/macosx/
>  > * Install BiocManager as usual
>  > * Use BiocManager::install() as usual
>  >
>  > Note: BiocManager::install() will automatically pick the new arm64 binaries so
>  > you should no longer need Xcode.
>  >
>  >
>  > Jennifer Wokaty
>  > they/them
>  > Bioconductor Core Team
>  > CUNY SPH
>  >
>  >       [[alternative HTML version deleted]]
>  >
>  > _______________________________________________
>  > Bioc-devel using r-project.org mailing list
>  > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>  -- 
>  Ramon Diaz-Uriarte
>  Department of Biochemistry, Lab B-31
>  Facultad de Medicina
>  Universidad Autónoma de Madrid 
>  Arzobispo Morcillo, 4
>  28029 Madrid
>  Spain
>
>  Phone: +34-91-497-2412
>
>  Email: rdiaz02 using gmail.com
>         r.diaz using uam.es
>
>  https://ligarto.org/rdiaz
>  _______________________________________________
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-- 
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-31
Facultad de Medicina
Universidad Autónoma de Madrid 
Arzobispo Morcillo, 4
28029 Madrid
Spain

Phone: +34-91-497-2412

Email: rdiaz02 using gmail.com
       r.diaz using uam.es

https://ligarto.org/rdiaz