[Bioc-devel] Broken stringi install on bioconductor_docker:RELEASE_3_16

[Mike Smith]

Hi Stevie,

I also found this same problem after our emails yesterday and opened an
issue on the Bioconductor_docker repo at
https://github.com/Bioconductor/bioconductor_docker/issues/59

In the short term I think Vince's suggestion of reinstalling stringi should
at least fix your workflow, and hopefully the underlying issue won't be too
tricky for the Bioc team to resolve.

Cheers,
Mike

On Fri, 11 Nov 2022 at 06:17, Stevie Pederson <stephen.pederson.au using gmail.com>
wrote:

> Hi,
>
> I've just instantiated a local container for RELEASE_3_16 & have this
> problem:
>
> library(stringi)
> Error: package or namespace load failed for ‘stringi’ in dyn.load(file,
> DLLpath = DLLpath, ...):
>  unable to load shared object
> '/usr/local/lib/R/site-library/stringi/libs/stringi.so':
>   libicui18n.so.66: cannot open shared object file: No such file or
> directory
>
> Not really sure how to fix it and I'm not sure how to file issues for
> docker containers so I hope reporting it here is OK
>
> Thanks,
>
> Stevie
>
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