[Bioc-devel] Question on package update and version bump

Jiping Wang jzw@ng @end|ng |rom northwe@tern@edu
Mon Jun 6 13:46:14 CEST 2022


Thanks. I noticed the source package of DegNorm has been updated to 1.7.1, but the windows and macosx version is still 1.7.0.

Also when will the changes be updated in the release version, which is currently 1.6.0?

From: Anestis Gkanogiannis <anestis using gkanogiannis.com>
Date: Monday, June 6, 2022 at 6:30 AM
To: Jiping Wang <jzwang using northwestern.edu>, bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: RE: [Bioc-devel] Question on package update and version bump
Hi,

I see DegNorm version 1.7.1 here https://urldefense.com/v3/__https://bioconductor.org/packages/devel/bioc/html/DegNorm.html__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvTnYY_Do$<https://urldefense.com/v3/__https:/bioconductor.org/packages/devel/bioc/html/DegNorm.html__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvTnYY_Do$>
and build report here https://urldefense.com/v3/__http://bioconductor.org/checkResults/devel/bioc-LATEST/DegNorm/__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvUjVapyY$<https://urldefense.com/v3/__http:/bioconductor.org/checkResults/devel/bioc-LATEST/DegNorm/__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvUjVapyY$>

Best regards,

Anestis Gkanogiannis, PhD
----------
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-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org> On Behalf Of Jiping Wang
Sent: 06 June 2022 13:21
To: bioc-devel using r-project.org
Subject: [Bioc-devel] Question on package update and version bump

Hi,

  I am writing to inquire the process of package update and version bump. I submitted updated package DegNorm with a version bump to 1.7.1 last Thursday and wonder about the status of it. My understanding is that usually I should receive an email notice about the status of it. See the help information from https://urldefense.com/v3/__https://contributions.bioconductor.org/git-version-control.html__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvgo9AdBk$<https://urldefense.com/v3/__https:/contributions.bioconductor.org/git-version-control.html__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvgo9AdBk$>

But I didn�t receive email notices. When I went to the https://urldefense.com/v3/__https://github.com/Bioconductor/Contributions/issues/__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvydOjXeo$<https://urldefense.com/v3/__https:/github.com/Bioconductor/Contributions/issues/__;!!Dq0X2DkFhyF93HkjWTBQKhk!T5uT_ynlcPqd_mYaeaniCBm7xo_qKJc9_guu3MqRGGOOSXhoDa6DuBkr96a67Dth3V9n3M2j-qdnz9AhXcjvydOjXeo$>
I didn�t find my package listed there? Is there anything wrong? Or the procedures have been changed?

In addition, my understanding is that my push is to the development repository. When or how these changes will be made to the release version of the package?
Thanks for help.

Best,
Ji-Ping Wang



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