[Bioc-devel] Package fails to install

Alemu Takele @|emut@k @end|ng |rom hotm@||@com
Wed Jul 27 17:03:30 CEST 2022

Hi the Bioconductor community,

I have submitted and published a package called SPsimSeq on Bioconductor but I'm having an issue of installing it using the command `BiocManager::install("SPsimSeq"). Apparently, I'm not the only one with this issue. When I run the above command, the error message says

> BiocManager::install("SPsimSeq")
Bioconductor version 3.12 (BiocManager 1.30.10), R 4.0.3 (2020-10-10)
Installing package(s) 'SPsimSeq'
trying URL 'https://bioconductor.org/packages/3.12/bioc/bin/windows/contrib/4.0/SPsimSeq_1.0.0.zip'
Content type 'application/zip' length 911693 bytes (890 KB)
downloaded 890 KB

package �SPsimSeq� successfully unpacked and MD5 sums checked

> library(SPsimSeq)
Error: package or namespace load failed for �SPsimSeq� in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called �latticeExtra�
In addition: Warning message:
In readRDS(f) : error reading the file

The package 'latticeExtra' is not part of SPsimSeq dependencies and when I try to install I never succeed.

Can you suggest to me the solution, please? Thanks in advance.

Best regards,

Alemu Takele, ASSEFA
Tel: +32 486 76 84 55
Skype: Alemu.tak

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