[Bioc-devel] Is switching to Rmd vignettes a policy? And "polygon edge not found" on macOS error.
Leonardo Collado Torres
|co||@dotor @end|ng |rom gm@||@com
Sat Jan 22 18:11:20 CET 2022
The author of `destiny` opened up an issue at `biocthis`
https://github.com/lcolladotor/biocthis/issues/27 claiming that all
vignettes need to be changed to Rmd files (aka, use knitr and the vignette
builder engine). I couldn't find such an announcement (and might have
missed it), but maybe there's some type of misunderstanding.
As a consequence of trying to change vignettes to Rmd, the author of
`destiny` is running into a `grid` issue best described at
It leads to errors such as "polygon edge not found" only on macOS. The
latest checks at
https://bioconductor.org/checkResults/release/bioc-LATEST/destiny/ are ok
though on macOS (particularly
Though I see that they correspond to
which is prior to the commits changing it to Rmd
In any case, has someone else run into this "polygon edge not found" macOS
error? In particular, if there's a system dependency missing, I might have
to update the `biocthis` GitHub Actions (GHA) workflow.
Thanks in advance.
Leonardo Collado Torres, Ph. D.
LIEBER INSTITUTE *for* BRAIN DEVELOPMENT
855 N. Wolfe St., Suite 300
Baltimore, MD 21205
lcolladotor using gmail.com
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