[Bioc-devel] Dependence from another New package

[Kern, Lori]

Ah okay. So this is an update to an existing software package to include the dependency on the new experiment data package.  Sorry I missed that part in the original email.   I would just wait until the data package makes it through the review.  In the future I would wait to make changes to the software package until the data package was accepted.

Cheers


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Anatoly Sorokin <lptolik using gmail.com>
Sent: Monday, September 27, 2021 5:52 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Dependence from another New package

Dear Lori, thank you!

I have additional question: our software package is already in the
bioconductor git, should I add the original github or bioconductor git to
the AdditionalPackage line to get another package added to the review?

Thank you,
Anatoly

On Mon, Sep 27, 2021 at 12:26 PM Kern, Lori <Lori.Shepherd using roswellpark.org>
wrote:

> https://secure-web.cisco.com/1ow-ZDhZ0NTF2PfdRSLQuskm2EA4UHdXlwovzapeXoTOWEzcC-nl0v9wpRPOFKLYduwBFLRlJ4GXsyIVbomFztWS8Nfrcn2x2KMyIDoAmyVUaDYn8Vr3Epdwcuylp2aH9e93s2nYrjmxWIZ1SXnYv28xwk57bE9X1wzSRA7Sdg5KNIgSeEjvZ5KCS70X2GFoSCWR43tSRh2DZ4nIijL9bLtnMQP_hk72VkBD_Cw8pWvSzo_8qvlhBcS6s4IufZiuR0uKcTZ7rsmVVXeoP2CRlLr8Krp1Nmbtv4mgwPavebSIYdrKmNlEsIsALUfXjMeRv/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%23submitting-related-packages
>
> In the documentation there is a way to submit related packages under the
> same review. If they are submitted under the same issue they can be found
> and reviewed together
>
> Get Outlook for iOS <https://secure-web.cisco.com/1V9yG0vYO9YdaYbIo5AbK8-ROWQ2XFAY4lkNFl5Kv3B4EZk9Y_ZiYjiDXzm7ktF382AXnOhqxzjrsKm4yu9zuNeJUHkmY2BKWvB5SMDZJOtgP4Fc7fsLM_BQqaxrQWOat-9nikhPY6swF0ziWp74RC2u6hQE35dwtID9CNkfWk7yVIcTLpUDgoah_ojEdn1lAepS5jlYJvIGYtpti1PiYxoIzx6qES3BmTe6sS1AzNcmOZn0HmTY8PeGV_DQUYU7QD82KNCQJaTKFXYzKe_nllnQibScf4TQlPm016hjGRkY_oo5kxGktH3UypVpd2i44/https%3A%2F%2Faka.ms%2Fo0ukef>
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> Anatoly Sorokin <lptolik using gmail.com>
> *Sent:* Sunday, September 26, 2021 7:59:17 PM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] Dependence from another New package
>
> Hi,
> We have submitted package, that required large data. According to
> suggestion from bioconductor team, we split the package into two parts,
> first of which was recently become available on AnnotationHub.
> Once the data package was on the hub, I've submitted the new version of the
> software package to the git, but validation had failed due to missing data
> package, as it is under review at the moment and not available for on
> bioconductor yet.
> Could any one suggest how to resolve this issue, when two packages under
> review simultaneously?
>
> Thank you in advance,
> Anatoly
>
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