[Bioc-devel] Error when building a package

[matine rb]

Thanks a lot for the help, I found the issue.

On Mon, Oct 4, 2021 at 9:40 PM Hervé Pagès <hpages.on.github using gmail.com>
wrote:

> Let's keep this conversation on the bioc-devel list where it started.
>
> On 04/10/2021 20:28, matine rb wrote:
> > Hi Hervé,
> >
> > yes, I am using R CMD build *--keep-empty-dirs -- no-resave-data* and
> > getting no error. I still don't know what is causing the problem.
>
> Again, make sure to read what's in the rectangular box on the following
> page:
>
>    http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/
>
> It's not about using --keep-empty-dirs or --no-resave-data when you run
> 'R CMD build'. It's about... well, just read it! (and follow the
> provided link).
>
> Best,
> H.
>
>
> >
> >
> >
> > On Mon, Oct 4, 2021 at 4:21 PM Hervé Pagès <hpages.on.github using gmail.com
> > <mailto:hpages.on.github using gmail.com>> wrote:
> >
> >     Hi,
> >
> >     Are you using the same settings as the build machines as explained in
> >     the rectangular box on the following page?
> >
> >     http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/
> >     <http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/>
> >
> >     Best,
> >     H.
> >
> >
> >     On 04/10/2021 13:50, matine rb wrote:
> >      > Dear Bioconductor community members,
> >      >
> >      > I have submitted the package 'HPiP' and the package has been
> >     accepted (link
> >      > :
> >      > http://bioconductor.org/packages/3.14/bioc/html/HPiP.html
> >     <http://bioconductor.org/packages/3.14/bioc/html/HPiP.html>).
> >     However, the
> >      > package has the following problem :
> >      >
> >      > package or namespace load failed for 'kableExtra':
> >      >   .onLoad failed in loadNamespace() for 'kableExtra', details:
> >      >
> >      > but, when I try to build and check the package locally, I got no
> >     error
> >      > message.
> >      >
> >      > May please someone advise me regarding this issue?
> >      >
> >      > With thanks,
> >      > Matineh
> >      >
> >      >       [[alternative HTML version deleted]]
> >      >
> >      > _______________________________________________
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> >      >
> >
> >     --
> >     Hervé Pagès
> >
> >     Bioconductor Core Team
> >     hpages.on.github using gmail.com <mailto:hpages.on.github using gmail.com>
> >
>
> --
> Hervé Pagès
>
> Bioconductor Core Team
> hpages.on.github using gmail.com
>

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