[Bioc-devel] Error when building a package

[Hervé Pagès]

Let's keep this conversation on the bioc-devel list where it started.

On 04/10/2021 20:28, matine rb wrote:
> Hi Hervé,
> 
> yes, I am using R CMD build *--keep-empty-dirs -- no-resave-data* and 
> getting no error. I still don't know what is causing the problem.

Again, make sure to read what's in the rectangular box on the following 
page:

   http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/

It's not about using --keep-empty-dirs or --no-resave-data when you run 
'R CMD build'. It's about... well, just read it! (and follow the 
provided link).

Best,
H.


> 
> 
> 
> On Mon, Oct 4, 2021 at 4:21 PM Hervé Pagès <hpages.on.github using gmail.com 
> <mailto:hpages.on.github using gmail.com>> wrote:
> 
>     Hi,
> 
>     Are you using the same settings as the build machines as explained in
>     the rectangular box on the following page?
> 
>     http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/
>     <http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/>
> 
>     Best,
>     H.
> 
> 
>     On 04/10/2021 13:50, matine rb wrote:
>      > Dear Bioconductor community members,
>      >
>      > I have submitted the package 'HPiP' and the package has been
>     accepted (link
>      > :
>      > http://bioconductor.org/packages/3.14/bioc/html/HPiP.html
>     <http://bioconductor.org/packages/3.14/bioc/html/HPiP.html>).
>     However, the
>      > package has the following problem :
>      >
>      > package or namespace load failed for 'kableExtra':
>      >   .onLoad failed in loadNamespace() for 'kableExtra', details:
>      >
>      > but, when I try to build and check the package locally, I got no
>     error
>      > message.
>      >
>      > May please someone advise me regarding this issue?
>      >
>      > With thanks,
>      > Matineh
>      >
>      >       [[alternative HTML version deleted]]
>      >
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>      >
> 
>     -- 
>     Hervé Pagès
> 
>     Bioconductor Core Team
>     hpages.on.github using gmail.com <mailto:hpages.on.github using gmail.com>
> 

-- 
Hervé Pagès

Bioconductor Core Team
hpages.on.github using gmail.com