[Bioc-devel] ERROR: More than one VignetteEngine specified.

Witold Wolski wew @end|ng |rom |gcz@ethz@ch
Mon Nov 22 09:51:00 CET 2021


Dear Lluis,

Thank you for looking into it. I deleted `it,` and it and the error went 
away.

Best,
Witek

On 19/11/2021 16:36, Lluís Revilla wrote:
> Hi Witek,
> 
> Probably it is a false positive, caused by a commented VignetteEngine on 
> https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16 
> <https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16> 
> 
> If you delete it (and the line below to be sure) I guess it will go away.
> 
> Best,
> 
> Lluís
> 
> On Fri, 19 Nov 2021 at 14:33, Witold Wolski <wew using fgcz.ethz.ch 
> <mailto:wew using fgcz.ethz.ch>> wrote:
> 
>     Hi,
> 
>     I am getting the following error when running BiocCheck
>     "ERROR: More than one VignetteEngine specified."
> 
>     But all the vignettes have the same
>     %\VignetteEngine{knitr::rmarkdown}
> 
>     specified.
>     Where else does BiocCheck look for vignetteEngine specification?
> 
> 
> 
>     Regards
>     Witek
> 
>     PS. the code can be found here.
>     https://github.com/protViz/prozor <https://github.com/protViz/prozor>
> 
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