[Bioc-devel] How to repeat the error: shape of 'skeleton' is not compatible with 'NROW(flesh)'

[Jianhong Ou, Ph.D.]

Hi Lori,

Thank you so much for the message.

Jianhong.
________________________________
From: Kern, Lori <Lori.Shepherd using RoswellPark.org>
Sent: Thursday, May 6, 2021 8:09 AM
To: Jianhong Ou, Ph.D. <jianhong.ou using duke.edu>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: How to repeat the error: shape of 'skeleton' is not compatible with 'NROW(flesh)'

This is a known issue with a recent push to IRanges.  The maintainers are aware and working on a fix.  You can follow the reported issue
https://<https://urldefense.com/v3/__https://github.com/Bioconductor/IRanges/issues/40__;!!OToaGQ!_eO94R27TcuA_bkDidtRGMe0b0MHs7Hpe74v7Mqlz_FUllmSPP5O3G3eNbFhkv_MfZE$>github.com/Bioconductor/IRanges/issues/40<https://urldefense.com/v3/__https://github.com/Bioconductor/IRanges/issues/40__;!!OToaGQ!_eO94R27TcuA_bkDidtRGMe0b0MHs7Hpe74v7Mqlz_FUllmSPP5O3G3eNbFhkv_MfZE$>

It should get resolved on its own shortly.

Cheers,


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Jianhong Ou, Ph.D. <jianhong.ou using duke.edu>
Sent: Thursday, May 6, 2021 7:50 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] How to repeat the error: shape of 'skeleton' is not compatible with 'NROW(flesh)'

Hi all,

In most recent build I got error message:

shape of 'skeleton' is not compatible with 'NROW(flesh)'

And I have trouble in repeating the error by Bioconductor/bioconductor_docker:devel.

I am asking will the bioconductor_docker will update soon or I should install the newest development version R by myself.

Thank you for your help.

Yours Sincerely,

Jianhong Ou

Email: jianhong.ou using duke.edu
Bioinformatician II
Department of Cell Biology
Duke University School of Medicine
Durham, NC, 27710

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