[Bioc-devel] Problem with updated cache on Bioc builders
|uk@@@weber@edu @end|ng |rom gm@||@com
Thu Jul 29 20:33:46 CEST 2021
Great, thank you!
On Thu, Jul 29, 2021 at 2:32 PM Kern, Lori <Lori.Shepherd using roswellpark.org>
> Thank you for making us aware.
> Its interesting because I have already cleaned this up and initialized the
> caches on the builders so I suspect there is a package that is somehow
> force creating the old location.
> Regardless, I will take care of correcting on the builders and notifying
> any offending package.
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Comprehensive Cancer Center
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Lukas
> Weber <lukas.weber.edu using gmail.com>
> *Sent:* Thursday, July 29, 2021 2:26 PM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Cc:* Helena L. Crowell <helena.crowell using uzh.ch>
> *Subject:* [Bioc-devel] Problem with updated cache on Bioc builders
> We have pushed an update to our package SpatialExperiment, and now have the
> following error in checks (pasted below) on the build report.
> On our local machines I can fix this error by deleting the old cache, as
> explained in the link in the error message.
> Is there a similar way that we can fix this on the builders, e.g. deleting
> the old cache?
> Error in (function (cache = getBFCOption("CACHE"), ask = interactive()) :
> DEFUNCT: As of BiocFileCache (>1.15.1), default caching location has
> Problematic cache: /Users/biocbuild/Library/Caches/BiocFileCache
> Lukas M. Weber, Ph.D.
> Postdoctoral Fellow
> Department of Biostatistics
> Johns Hopkins Bloomberg School of Public Health
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