[Bioc-devel] pre-receive hook declined

[Kern, Lori]

The current Bioconductor release is RELEASE_3_13 not RELEASE_3_12.  Past release branches are frozen and will not accept commits.  You should only be updating RELEASE_3_13 and master branches for this release cycle.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Clay Wright <wright.clay using gmail.com>
Sent: Tuesday, July 27, 2021 3:44 PM
To: bioc-devel <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] pre-receive hook declined

Hi,

I am now encountering the following similar error trying to push a bugfix
to my package. Does my account also need a similar update to Victor and
Mike? Or is this something on my end? I just finally updated my github
personal access tokens, maybe that's the issue? I haven't tried a fresh
clone of the repository yet.


git push origin RELEASE_3_12

Enumerating objects: 17, done.
Counting objects: 100% (17/17), done.
Delta compression using up to 4 threads
Compressing objects: 100% (12/12), done.
Writing objects: 100% (12/12), 1.48 KiB | 151.00 KiB/s, done.
Total 12 (delta 9), reused 0 (delta 0), pack-reused 0
remote: FATAL: W refs/heads/RELEASE_3_12 packages/flowTime r.wright DENIED
by fallthru
remote: error: hook declined to update refs/heads/RELEASE_3_12
To git.bioconductor.org:packages/flowTime.git
 ! [remote rejected] RELEASE_3_12 -> RELEASE_3_12 (hook declined)
error: failed to push some refs to 'git.bioconductor.org:
packages/flowTime.git'


Thanks!
Clay


On Fri, Jul 2, 2021 at 1:30 PM Victor Yuan <victor.2wy using gmail.com> wrote:

> It works for me as well now. Thanks!
>
> On Thu, Jul 1, 2021 at 8:21 AM Michael Love <michaelisaiahlove using gmail.com>
> wrote:
>
> > That works for me. Thanks.
> >
> > Mike
> >
> > On Thu, Jul 1, 2021 at 2:07 PM Nitesh Turaga <nturaga.bioc using gmail.com>
> > wrote:
> > >
> > > Hi
> > >
> > > Please try again. You should not see this error anymore.
> > >
> > > This was a mistake on our end.
> > >
> > > Best,
> > >
> > > Nitesh
> > >
> > >
> > >
> > > Nitesh Turaga
> > > Scientist II, Department of Data Science,
> > > Bioconductor Core Team Member
> > > Dana Farber Cancer Institute
> > >
> > > > On Jul 1, 2021, at 1:49 AM, Michael Love <
> michaelisaiahlove using gmail.com>
> > wrote:
> > > >
> > > > I'm getting a similar error, trying to push commits for a new package
> > > > submission. So this is my first attempt to push to Bioc git servers
> > > > for this package.
> > > >
> > > > After following instructions from
> > > > https://secure-web.cisco.com/1zG69ZBuzV7x_en4chlgvb19YLMqAEk7U6ai5rDu9xpBwEhrMQex-fuviwZN6iTPYZAIuOYCT0y6swy9R-VpAohluoUDSNinbE8mr04UYClOnZRG_-58QOWQNJRHe1BwNZmeuwGL-ZcbYY4sgiXNhG-V1YcEvftuYFXf4emiBzFXb61tjbZlguHr39q93KL6enc_y5jtLkynm1DW_tXA9qeB_CZu2TqpngRUGfAqpO6iNeSM0rpLMIxlhTC-ZXp-MEoIdT5o9qhWz29dCeo04_fa2veI2o0uKB3JcbsfhepF3VBeKF3G7tWlSEuME4Lv5/https%3A%2F%2Fbioconductor.org%2Fdevelopers%2Fhow-to%2Fgit%2Fnew-package-workflow%2F
> > > > ...
> > > >
> > > > spatialDmelxsim git:(main) > git push upstream main:master
> > > > Enumerating objects: 20, done.
> > > > Counting objects: 100% (20/20), done.
> > > > Delta compression using up to 8 threads
> > > > Compressing objects: 100% (10/10), done.
> > > > Writing objects: 100% (12/12), 1.60 KiB | 1.60 MiB/s, done.
> > > > Total 12 (delta 5), reused 0 (delta 0), pack-reused 0
> > > > remote: Traceback (most recent call last):
> > > > remote:   File
> > "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
> > > > line 90, in <module>
> > > > remote:     apply_hooks(hooks_dict)
> > > > remote:   File
> > "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
> > > > line 72, in apply_hooks
> > > > remote:     if hooks_dict["pre-receive-hook-merge-markers"]:  #
> enable
> > hook
> > > > remote: KeyError: 'pre-receive-hook-merge-markers'
> > > > To git.bioconductor.org:packages/spatialDmelxsim
> > > > ! [remote rejected] main -> master (pre-receive hook declined)
> > > > error: failed to push some refs to
> > > > 'git.bioconductor.org:packages/spatialDmelxsim'
> > >
> >
>
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>
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