[Bioc-devel] pre-receive hook declined

[Nitesh Turaga]

Hi,

This is because all commits to RELEASE_3_12 have been blocked during the release of Bioconductor 3.13.

You can now only commit/push to RELEASE_3_13 and devel.

Nitesh Turaga
Scientist II, Department of Data Science,
Bioconductor Core Team Member
Dana Farber Cancer Institute

> On Jul 27, 2021, at 3:44 PM, Clay Wright <wright.clay using gmail.com> wrote:
> 
> Hi,
> 
> I am now encountering the following similar error trying to push a bugfix
> to my package. Does my account also need a similar update to Victor and
> Mike? Or is this something on my end? I just finally updated my github
> personal access tokens, maybe that's the issue? I haven't tried a fresh
> clone of the repository yet.
> 
> 
> git push origin RELEASE_3_12
> 
> Enumerating objects: 17, done.
> Counting objects: 100% (17/17), done.
> Delta compression using up to 4 threads
> Compressing objects: 100% (12/12), done.
> Writing objects: 100% (12/12), 1.48 KiB | 151.00 KiB/s, done.
> Total 12 (delta 9), reused 0 (delta 0), pack-reused 0
> remote: FATAL: W refs/heads/RELEASE_3_12 packages/flowTime r.wright DENIED
> by fallthru
> remote: error: hook declined to update refs/heads/RELEASE_3_12
> To git.bioconductor.org:packages/flowTime.git
> ! [remote rejected] RELEASE_3_12 -> RELEASE_3_12 (hook declined)
> error: failed to push some refs to 'git.bioconductor.org:
> packages/flowTime.git'
> 
> 
> Thanks!
> Clay
> 
> 
> On Fri, Jul 2, 2021 at 1:30 PM Victor Yuan <victor.2wy using gmail.com> wrote:
> 
>> It works for me as well now. Thanks!
>> 
>> On Thu, Jul 1, 2021 at 8:21 AM Michael Love <michaelisaiahlove using gmail.com>
>> wrote:
>> 
>>> That works for me. Thanks.
>>> 
>>> Mike
>>> 
>>> On Thu, Jul 1, 2021 at 2:07 PM Nitesh Turaga <nturaga.bioc using gmail.com>
>>> wrote:
>>>> 
>>>> Hi
>>>> 
>>>> Please try again. You should not see this error anymore.
>>>> 
>>>> This was a mistake on our end.
>>>> 
>>>> Best,
>>>> 
>>>> Nitesh
>>>> 
>>>> 
>>>> 
>>>> Nitesh Turaga
>>>> Scientist II, Department of Data Science,
>>>> Bioconductor Core Team Member
>>>> Dana Farber Cancer Institute
>>>> 
>>>>> On Jul 1, 2021, at 1:49 AM, Michael Love <
>> michaelisaiahlove using gmail.com>
>>> wrote:
>>>>> 
>>>>> I'm getting a similar error, trying to push commits for a new package
>>>>> submission. So this is my first attempt to push to Bioc git servers
>>>>> for this package.
>>>>> 
>>>>> After following instructions from
>>>>> https://bioconductor.org/developers/how-to/git/new-package-workflow/
>>>>> ...
>>>>> 
>>>>> spatialDmelxsim git:(main) > git push upstream main:master
>>>>> Enumerating objects: 20, done.
>>>>> Counting objects: 100% (20/20), done.
>>>>> Delta compression using up to 8 threads
>>>>> Compressing objects: 100% (10/10), done.
>>>>> Writing objects: 100% (12/12), 1.60 KiB | 1.60 MiB/s, done.
>>>>> Total 12 (delta 5), reused 0 (delta 0), pack-reused 0
>>>>> remote: Traceback (most recent call last):
>>>>> remote:   File
>>> "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
>>>>> line 90, in <module>
>>>>> remote:     apply_hooks(hooks_dict)
>>>>> remote:   File
>>> "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
>>>>> line 72, in apply_hooks
>>>>> remote:     if hooks_dict["pre-receive-hook-merge-markers"]:  #
>> enable
>>> hook
>>>>> remote: KeyError: 'pre-receive-hook-merge-markers'
>>>>> To git.bioconductor.org:packages/spatialDmelxsim
>>>>> ! [remote rejected] main -> master (pre-receive hook declined)
>>>>> error: failed to push some refs to
>>>>> 'git.bioconductor.org:packages/spatialDmelxsim'
>>>> 
>>> 
>> 
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>> 
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>> 
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